Mouse C57BL/6NJ (C57BL_6NJ_v1)
Description

SRY (sex determining region Y)-box 6 [Source:MGI Symbol;Acc:MGI:98368]

Gene Synonyms

AI987981, SOX-LZ, Sox-6

Reference strain equivalent
About this transcript

This transcript has 16 exons, is annotated with 28 domains and features and maps to 450 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0086559.1-2903828aaMGP_C57BL6NJ_P0086559
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0086552.1-8668786aaMGP_C57BL6NJ_P0086552
 
Protein coding
CCDS40097, CCDS40098, CCDS52369A0A0U1RNH0 A0A0U1RNI3 A0A0U1RNW8
A0A0U1RPC1 E9PUW0 P40645
Q3V1J7 Q8BSS6
-
MGP_C57BL6NJ_T0086554.1-8227827aaMGP_C57BL6NJ_P0086554
 
Protein coding
--
MGP_C57BL6NJ_T0086555.1-8193785aaMGP_C57BL6NJ_P0086555
 
Protein coding
--
MGP_C57BL6NJ_T0086553.1-8079787aaMGP_C57BL6NJ_P0086553
 
Protein coding
--
MGP_C57BL6NJ_T0086556.1-5122787aaMGP_C57BL6NJ_P0086556
 
Protein coding
--
MGP_C57BL6NJ_T0086558.1-2863828aaMGP_C57BL6NJ_P0086558
 
Protein coding
--
MGP_C57BL6NJ_T0086557.1-2825827aaMGP_C57BL6NJ_P0086557
 
Protein coding
--
MGP_C57BL6NJ_T0086565.1-448125aaMGP_C57BL6NJ_P0086565
 
Protein coding
--
MGP_C57BL6NJ_T0086563.1-331110aaMGP_C57BL6NJ_P0086563
 
Protein coding
--
MGP_C57BL6NJ_T0086561.1-828No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0086566.1-479No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0086562.1-3855No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0086560.1-2258No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0086567.1-1980No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0086564.1-553No protein-
 
Retained intron
--
Statistics

Exons: 16, Coding exons: 14, Transcript length: 8,668 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40645

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS40097, CCDS40098, CCDS52369

Version

MGP_C57BL6NJ_T0086552.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.