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Transcript: MGP_C57BL6NJ_T0075863.1

Description

stromal antigen 3 [Source:MGI Symbol;Acc:MGI:1355311]

Gene Synonyms

SA-2, stromalin 3

Location

Chromosome 5: 148,428,111-148,438,622 forward strand.

Reference strain equivalent

Stag3

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features and maps to 82 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030697.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0075866.1-42111240aaMGP_C57BL6NJ_P0075866
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0075867.1-41231240aaMGP_C57BL6NJ_P0075867
 
Protein coding
--
MGP_C57BL6NJ_T0075863.1-989199aaMGP_C57BL6NJ_P0075863
 
Protein coding
CCDS39344E0CXH6 E0CYH8 F6TV98
F7CBN2 O70576 		-
MGP_C57BL6NJ_T0075868.1-763200aaMGP_C57BL6NJ_P0075868
 
Protein coding
--
MGP_C57BL6NJ_T0075870.1-458152aaMGP_C57BL6NJ_P0075870
 
Protein coding
--
MGP_C57BL6NJ_T0075871.1-59144aaMGP_C57BL6NJ_P0075871
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0075869.1-574No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0075864.1-4669No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0075865.1-4456No protein-
 
Retained intron
--

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 989 bps, Translation length: 199 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70576

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS39344

Version

MGP_C57BL6NJ_T0075863.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.