Ensembl mirror
More ▼
Search »
Mouse C57BL/6NJ (C57BL_6NJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_C57BL6NJ_T0072960.1

Description

RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]

Gene Synonyms

2810428M05Rik, 6330416M07Rik, AW455998, AW538594, D5Bwg0860e, Ripx, Rpipx

Location

Chromosome 5: 93,201,366-93,289,860 forward strand.

Reference strain equivalent

Rufy3

About this transcript

This transcript has 20 exons, is annotated with 26 domains and features and maps to 234 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030140.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0072960.1-3536669aaMGP_C57BL6NJ_P0072960
 
Protein coding
CCDS19403, CCDS80323, CCDS80324, CCDS80325A0A0G2JFT8 Q9D394 Ensembl Canonical
MGP_C57BL6NJ_T0072963.1-4049469aaMGP_C57BL6NJ_P0072963
 
Protein coding
--
MGP_C57BL6NJ_T0072961.1-3703519aaMGP_C57BL6NJ_P0072961
 
Protein coding
--
MGP_C57BL6NJ_T0072962.1-2182487aaMGP_C57BL6NJ_P0072962
 
Protein coding
--
MGP_C57BL6NJ_T0072966.1-2077487aaMGP_C57BL6NJ_P0072966
 
Protein coding
--
MGP_C57BL6NJ_T0072965.1-2722No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0072964.1-2336No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0072967.1-619No protein-
 
Retained intron
--

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 3,536 bps, Translation length: 669 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D394

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS19403, CCDS80323, CCDS80324, CCDS80325

Version

MGP_C57BL6NJ_T0072960.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.