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Transcript: MGP_C57BL6NJ_T0055483.1

Description

sodium channel, voltage-gated, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:98248]

Gene Synonyms

6430408L10, A230052E19Rik, Nav1.2, Scn2a

Location

Chromosome 2: 67,369,520-67,522,890 forward strand.

Reference strain equivalent

Scn2a

About this transcript

This transcript has 29 exons, is annotated with 69 domains and features and maps to 718 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0026198.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0055483.1-84121836aaMGP_C57BL6NJ_P0055483
 
Protein coding
CCDS38130A0A0J9YTW6 A0A0J9YTX0 A9JQD3
B1AWN6 F7AMU5 		Ensembl Canonical
MGP_C57BL6NJ_T0055488.1-81671836aaMGP_C57BL6NJ_P0055488
 
Protein coding
--
MGP_C57BL6NJ_T0055487.1-58381836aaMGP_C57BL6NJ_P0055487
 
Protein coding
--
MGP_C57BL6NJ_T0055484.1-1810504aaMGP_C57BL6NJ_P0055484
 
Protein coding
--
MGP_C57BL6NJ_T0055490.1-576106aaMGP_C57BL6NJ_P0055490
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0055491.1-51398aaMGP_C57BL6NJ_P0055491
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0055485.1-2454No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0055486.1-1482No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0055489.1-698No protein-
 
Retained intron
--

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 8,412 bps, Translation length: 1,836 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS38130

Version

MGP_C57BL6NJ_T0055483.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.