Mouse C57BL/6NJ (C57BL_6NJ_v1)
Description

zinc finger E-box binding homeobox 1 [Source:MGI Symbol;Acc:MGI:1344313]

Gene Synonyms

3110032K11Rik, AREB6, BZP, MEB1, Nil2, TCF-8, Tcf18, Tcf8, Tw, ZEB, Zfhep, Zfhx1a, Zfx1a, Zfx1ha, [delta]EF1

Location
Reference strain equivalent
About this transcript

This transcript has 8 exons, is annotated with 67 domains and features and maps to 246 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0049337.1-58051117aaMGP_C57BL6NJ_P0049337
 
Protein coding
CCDS29039E0CX96 E0CY37 E9PXY5
H3BJU2 Q64318
Ensembl Canonical
MGP_C57BL6NJ_T0049339.1-900293aaMGP_C57BL6NJ_P0049339
 
Protein coding
--
MGP_C57BL6NJ_T0049343.1-774154aaMGP_C57BL6NJ_P0049343
 
Protein coding
--
MGP_C57BL6NJ_T0049340.1-1485105aaMGP_C57BL6NJ_P0049340
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0049341.1-121519aaMGP_C57BL6NJ_P0049341
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0049348.1-2662No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0049346.1-1610No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0049344.1-819No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0049342.1-790No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0049345.1-2464No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0049338.1-1938No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0049347.1-57381110aaMGP_C57BL6NJ_P0049347
 
Unknown likely coding
--
Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,805 bps, Translation length: 1,117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q64318

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS29039

Version

MGP_C57BL6NJ_T0049337.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.