Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: MGP_C57BL6NJ_T0057047.1

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Description

brain derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:88145]

Location

Chromosome 2: 115,669,430-115,721,724 forward strand.

Reference strain equivalent

About this transcript

This transcript has 2 exons, is annotated with 21 domains and features and maps to 203 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0026661.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0057057.1	-	3887	289aa	MGP_C57BL6NJ_P0057057	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0057047.1	-	4248	257aa	MGP_C57BL6NJ_P0057047	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38193, CCDS38194	A2AII2 H9H9S8 P21237 Q541P3	-
MGP_C57BL6NJ_T0057048.1	-	4107	249aa	MGP_C57BL6NJ_P0057048	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057049.1	-	4024	249aa	MGP_C57BL6NJ_P0057049	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057054.1	-	3955	249aa	MGP_C57BL6NJ_P0057054	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057052.1	-	3947	249aa	MGP_C57BL6NJ_P0057052	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057056.1	-	3836	249aa	MGP_C57BL6NJ_P0057056	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057055.1	-	3821	249aa	MGP_C57BL6NJ_P0057055	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057050.1	-	3812	249aa	MGP_C57BL6NJ_P0057050	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057051.1	-	3801	249aa	MGP_C57BL6NJ_P0057051	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0057053.1	-	3689	249aa	MGP_C57BL6NJ_P0057053	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-

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Protein summary

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Protein domains for MGP_C57BL6NJ_P0057047.

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