Mouse C3H/HeJ (C3H_HeJ_v1)
Description

tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]

Gene Synonyms

AA986836, AI854628, TM2, Tm3, Tmpa, Tpm-1, Tpma, alpha-TM

Location
Reference strain equivalent
About this transcript

This transcript has 9 exons, is annotated with 35 domains and features and maps to 239 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0092545.1-1824326aaMGP_C3HHeJ_P0092545
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0092546.1-2890245aaMGP_C3HHeJ_P0092546
 
Protein coding
--
MGP_C3HHeJ_T0092543.1-1898284aaMGP_C3HHeJ_P0092543
 
Protein coding
--
MGP_C3HHeJ_T0092558.1-1797284aaMGP_C3HHeJ_P0092558
 
Protein coding
--
MGP_C3HHeJ_T0092541.1-1759284aaMGP_C3HHeJ_P0092541
 
Protein coding
CCDS23311, CCDS52841, CCDS52842, CCDS52843, CCDS52844, CCDS52845, CCDS52846, CCDS52847, CCDS52848B7ZNL3 E9Q448 E9Q450
E9Q452 E9Q453 E9Q454
E9Q455 E9Q456 F8WID5
G5E8R0 G5E8R1 G5E8R2
P58771 Q545Y3 Q564G1
Q8BP43 Q8BSH3 S4R261
S4R2U0
-
MGP_C3HHeJ_T0092549.1-1742284aaMGP_C3HHeJ_P0092549
 
Protein coding
--
MGP_C3HHeJ_T0092542.1-1714248aaMGP_C3HHeJ_P0092542
 
Protein coding
--
MGP_C3HHeJ_T0092548.1-1677284aaMGP_C3HHeJ_P0092548
 
Protein coding
--
MGP_C3HHeJ_T0092544.1-1607248aaMGP_C3HHeJ_P0092544
 
Protein coding
--
MGP_C3HHeJ_T0092553.1-1259284aaMGP_C3HHeJ_P0092553
 
Protein coding
--
MGP_C3HHeJ_T0092554.1-1208284aaMGP_C3HHeJ_P0092554
 
Protein coding
--
MGP_C3HHeJ_T0092551.1-1054281aaMGP_C3HHeJ_P0092551
 
Protein coding
--
MGP_C3HHeJ_T0092555.1-998251aaMGP_C3HHeJ_P0092555
 
Protein coding
--
MGP_C3HHeJ_T0092556.1-962287aaMGP_C3HHeJ_P0092556
 
Protein coding
--
MGP_C3HHeJ_T0092552.1-904245aaMGP_C3HHeJ_P0092552
 
Protein coding
--
MGP_C3HHeJ_T0092557.1-887248aaMGP_C3HHeJ_P0092557
 
Protein coding
--
MGP_C3HHeJ_T0092547.1-1544157aaMGP_C3HHeJ_P0092547
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0092550.1-141949aaMGP_C3HHeJ_P0092550
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0092559.1-1274No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0092561.1-649No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0092560.1-1123No protein-
 
Retained intron
--
Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,759 bps, Translation length: 284 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58771

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS23311, CCDS52841, CCDS52842, CCDS52843, CCDS52844, CCDS52845, CCDS52846, CCDS52847, CCDS52848

Version

MGP_C3HHeJ_T0092541.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.