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Transcript: MGP_C3HHeJ_T0079659.1

Description

protein tyrosine phosphatase, non-receptor type 6 [Source:MGI Symbol;Acc:MGI:96055]

Gene Synonyms

70Z-SHP, Hcp, Hcph, PTPTY-42, Ptp1C, SH-PTP1, SHP-1, hcp, me

Location

Chromosome 6: 126,619,073-126,631,604 reverse strand.

Reference strain equivalent

Ptpn6

About this transcript

This transcript has 16 exons, is annotated with 41 domains and features and maps to 286 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0030963.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0079661.1-2308597aaMGP_C3HHeJ_P0079661
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0079660.1-2226597aaMGP_C3HHeJ_P0079660
 
Protein coding
--
MGP_C3HHeJ_T0079659.1-2219595aaMGP_C3HHeJ_P0079659
 
Protein coding
CCDS39628, CCDS51908G3UWU7 G3UXM2 G3UYY5
G3UZU6 P29351 Q3UCJ0
-
MGP_C3HHeJ_T0079663.1-1743556aaMGP_C3HHeJ_P0079663
 
Protein coding
--
MGP_C3HHeJ_T0079662.1-456100aaMGP_C3HHeJ_P0079662
 
Protein coding
--
MGP_C3HHeJ_T0079668.1-33067aaMGP_C3HHeJ_P0079668
 
Protein coding
--
MGP_C3HHeJ_T0079664.1-13444aaMGP_C3HHeJ_P0079664
 
Protein coding
--
MGP_C3HHeJ_T0079665.1-12040aaMGP_C3HHeJ_P0079665
 
Protein coding
--
MGP_C3HHeJ_T0079667.1-198No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0079666.1-421No protein-
 
Retained intron
--
MGP_C3HHeJ_T0079669.1-371No protein-
 
Retained intron
--

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,219 bps, Translation length: 595 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29351

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS39628, CCDS51908

Version

MGP_C3HHeJ_T0079659.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.