Mouse C3H/HeJ (C3H_HeJ_v1)
Description

POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]

Gene Synonyms

2810482H01Rik, NF-A1, Oct-1, Oct-1A, Oct-1B, Oct-1C, Oct-1z, Oct1, Otf-1, Otf1, oct-1

Reference strain equivalent
About this transcript

This transcript has 17 exons, is annotated with 53 domains and features and maps to 507 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0022966.1-13022793aaMGP_C3HHeJ_P0022966
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0022965.1-13050782aaMGP_C3HHeJ_P0022965
 
Protein coding
CCDS15444, CCDS35760, CCDS35761, CCDS48430A0A0A0MQE0 A0A0A0MQM6 A0A0A6YWN1
A0A0R4J1Z4 E9Q6Z8 F8VQL7
H3BKX3 I1E4X2 P25425
V9GXQ7
-
MGP_C3HHeJ_T0022970.1-2671758aaMGP_C3HHeJ_P0022970
 
Protein coding
--
MGP_C3HHeJ_T0022969.1-2591769aaMGP_C3HHeJ_P0022969
 
Protein coding
--
MGP_C3HHeJ_T0022974.1-2402758aaMGP_C3HHeJ_P0022974
 
Protein coding
--
MGP_C3HHeJ_T0022973.1-2258706aaMGP_C3HHeJ_P0022973
 
Protein coding
--
MGP_C3HHeJ_T0022975.1-2241746aaMGP_C3HHeJ_P0022975
 
Protein coding
--
MGP_C3HHeJ_T0022968.1-2201701aaMGP_C3HHeJ_P0022968
 
Protein coding
--
MGP_C3HHeJ_T0022967.1-1745580aaMGP_C3HHeJ_P0022967
 
Protein coding
--
MGP_C3HHeJ_T0022979.1-626163aaMGP_C3HHeJ_P0022979
 
Protein coding
--
MGP_C3HHeJ_T0022981.1-2547aaMGP_C3HHeJ_P0022981
 
Protein coding
--
MGP_C3HHeJ_T0022971.1-22373aaMGP_C3HHeJ_P0022971
 
Protein coding
--
MGP_C3HHeJ_T0022978.1-2249No protein-
 
Retained intron
--
MGP_C3HHeJ_T0022976.1-2206No protein-
 
Retained intron
--
MGP_C3HHeJ_T0022980.1-2131No protein-
 
Retained intron
--
MGP_C3HHeJ_T0022977.1-1859No protein-
 
Retained intron
--
MGP_C3HHeJ_T0022972.1-1210No protein-
 
Retained intron
--
Statistics

Exons: 17, Coding exons: 17, Transcript length: 13,050 bps, Translation length: 782 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25425

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS15444, CCDS35760, CCDS35761, CCDS48430

Version

MGP_C3HHeJ_T0022965.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.