Transcript: MGP_BALBcJ_T0080378.1

Description

integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]

Gene Synonyms

2700050P07Rik, AI646725

Location

Chromosome 6: 126,527,434-126,542,437 reverse strand.

Reference strain equivalent

Itfg2

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features and maps to 238 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0031304.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0080378.1	-	2327	443aa	MGP_BALBcJ_P0080378	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20572	A0A0N4SUV5 A0A0N4SVX2 A0A0N4SW06 A0A0N4SW62 Q3TWL5 Q91WI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0080380.1	-	3198	358aa	MGP_BALBcJ_P0080380	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0080381.1	-	1394	411aa	MGP_BALBcJ_P0080381	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0080379.1	-	338	21aa	MGP_BALBcJ_P0080379	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0080384.1	-	724	87aa	MGP_BALBcJ_P0080384	Nonsense mediated decay		-	-
MGP_BALBcJ_T0080385.1	-	655	136aa	MGP_BALBcJ_P0080385	Nonsense mediated decay		-	-
MGP_BALBcJ_T0080386.1	-	2296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0080387.1	-	1957	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0080383.1	-	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0080382.1	-	353	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,327 bps, Translation length: 443 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91WI7

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS20572

Version

MGP_BALBcJ_T0080378.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0080378.1

Summary

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Transcript: MGP_BALBcJ_T0080378.1

Summary

About Us

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