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Transcript: MGP_BALBcJ_T0025816.1

Description

collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]

Gene Synonyms

endostatin

Location

Chromosome 10: 74,851,671-74,968,155 reverse strand.

Reference strain equivalent

Col18a1

About this transcript

This transcript has 42 exons, is annotated with 44 domains and features and maps to 518 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0017330.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0025817.1-63381774aaMGP_BALBcJ_P0025817
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0025816.1-50631315aaMGP_BALBcJ_P0025816
 
Protein coding
CCDS23953, CCDS48604D3Z556 D3Z5C2 E9QPX1
P39061 		-
MGP_BALBcJ_T0025818.1-47911527aaMGP_BALBcJ_P0025818
 
Protein coding
--
MGP_BALBcJ_T0025820.1-1956562aaMGP_BALBcJ_P0025820
 
Protein coding
--
MGP_BALBcJ_T0025819.1-717161aaMGP_BALBcJ_P0025819
 
Protein coding
--

Summary

Statistics

Exons: 42, Coding exons: 42, Transcript length: 5,063 bps, Translation length: 1,315 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P39061

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS23953, CCDS48604

Version

MGP_BALBcJ_T0025816.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.