Mouse BALB/cJ (BALB_cJ_v1)
Description

POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]

Gene Synonyms

2810482H01Rik, NF-A1, Oct-1, Oct-1A, Oct-1B, Oct-1C, Oct-1z, Oct1, Otf-1, Otf1, oct-1

Reference strain equivalent
About this transcript

This transcript has 18 exons, is annotated with 54 domains and features and maps to 496 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0023161.1-13022793aaMGP_BALBcJ_P0023161
 
Protein coding
CCDS15444, CCDS35760, CCDS35761, CCDS48430A0A0A0MQE0 A0A0A0MQM6 A0A0A6YWN1
A0A0R4J1Z4 E9Q6Z8 F8VQL7
H3BKX3 I1E4X2 P25425
V9GXQ7
Ensembl Canonical
MGP_BALBcJ_T0023162.1-13050782aaMGP_BALBcJ_P0023162
 
Protein coding
--
MGP_BALBcJ_T0023166.1-2679746aaMGP_BALBcJ_P0023166
 
Protein coding
--
MGP_BALBcJ_T0023167.1-2671758aaMGP_BALBcJ_P0023167
 
Protein coding
--
MGP_BALBcJ_T0023165.1-2591769aaMGP_BALBcJ_P0023165
 
Protein coding
--
MGP_BALBcJ_T0023171.1-2402758aaMGP_BALBcJ_P0023171
 
Protein coding
--
MGP_BALBcJ_T0023172.1-2313770aaMGP_BALBcJ_P0023172
 
Protein coding
--
MGP_BALBcJ_T0023170.1-2258706aaMGP_BALBcJ_P0023170
 
Protein coding
--
MGP_BALBcJ_T0023164.1-2201701aaMGP_BALBcJ_P0023164
 
Protein coding
--
MGP_BALBcJ_T0023163.1-1745580aaMGP_BALBcJ_P0023163
 
Protein coding
--
MGP_BALBcJ_T0023176.1-626163aaMGP_BALBcJ_P0023176
 
Protein coding
--
MGP_BALBcJ_T0023178.1-2547aaMGP_BALBcJ_P0023178
 
Protein coding
--
MGP_BALBcJ_T0023168.1-22373aaMGP_BALBcJ_P0023168
 
Protein coding
--
MGP_BALBcJ_T0023175.1-2322No protein-
 
Retained intron
--
MGP_BALBcJ_T0023173.1-2206No protein-
 
Retained intron
--
MGP_BALBcJ_T0023177.1-2139No protein-
 
Retained intron
--
MGP_BALBcJ_T0023174.1-1859No protein-
 
Retained intron
--
MGP_BALBcJ_T0023169.1-1210No protein-
 
Retained intron
--
Statistics

Exons: 18, Coding exons: 17, Transcript length: 13,022 bps, Translation length: 793 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25425

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS15444, CCDS35760, CCDS35761, CCDS48430

Version

MGP_BALBcJ_T0023161.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.