| FBtr0302148 | Pvr-RJ | 5627 | 1577aa | FBpp0291358 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JHB7 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0079628 | Pvr-RD | 5893 | 1509aa | FBpp0089341 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IPG1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0301339 | Pvr-RH | 5788 | 1474aa | FBpp0290553 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JHB8 Q8T4M0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0302147 | Pvr-RI | 5480 | 1528aa | FBpp0291357 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C1C3C7 C4IXZ5 E1JHB6
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0332416 | Pvr-RM | 5453 | 1568aa | FBpp0304689 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PCX2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0079629 | Pvr-RE | 5311 | 1503aa | FBpp0089342 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KTI8 Q8T4L8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0079625 | Pvr-RA | 5276 | 1509aa | FBpp0079244 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8T4L9 Q8T9F6 Q9VLQ8
| APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0079626 | Pvr-RB | 5276 | 1509aa | FBpp0079245 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IPG1 Q95P10 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0303108 | Pvr-RK | 5249 | 1500aa | FBpp0292227 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9MRE1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0332418 | Pvr-RO | 5246 | 1499aa | FBpp0304691 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PCJ1 Q1LZ47 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0332417 | Pvr-RN | 5246 | 1499aa | FBpp0304690 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KTI7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0301338 | Pvr-RG | 5153 | 1468aa | FBpp0290552 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B6IDV6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0303109 | Pvr-RL | 5149 | 1509aa | FBpp0292228 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IPG1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
