Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0083456 SF1-RA

Description

Splicing factor 1

Gene Synonyms

SF1

Location

About this transcript

This transcript has 6 exons, is annotated with 34 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0083456	SF1-RA	2784	787aa	FBpp0082897	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXI7 Q95S23 Q9U1J9 Q9VEJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0331707	SF1-RC	2708	323aa	FBpp0304096	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGU8	-
FBtr0331706	SF1-RB	1533	347aa	FBpp0304095	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG60 H1UUB8	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,784 bps, Translation length: 787 residues

Version

FBtr0083456

Type

Protein coding

Annotation Method

Feature imported from FlyBase.