Transcript: FBtr0081029 rdo-RA

Description

reduced ocelli

Gene Synonyms

rdo

Location

About this transcript

This transcript has 15 exons, is annotated with 38 domains and features and maps to 31 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0340228	rdo-RB	3848	757aa	FBpp0309203	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J6K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0081029	rdo-RA	3800	741aa	FBpp0080582	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAM7 Q9VJA9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 15, Coding exons: 12, Transcript length: 3,800 bps, Translation length: 741 residues

Version

FBtr0081029

Type

Protein coding

Annotation Method

Feature imported from FlyBase.