Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0080880 CG5888-RA

Gene Synonyms

CG5888

Location

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features and maps to 29 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0080880	CG5888-RA	1881	455aa	FBpp0080437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KT58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0340234	CG5888-RB	1727	455aa	FBpp0309209	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1NZE7 Q7KT58	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,881 bps, Translation length: 455 residues

Version

FBtr0080880

Type

Protein coding

Annotation Method

Feature imported from FlyBase.