Transcript: ENST00000695951.1 IL17REL-203

Description

interleukin 17 receptor E like [Source:HGNC Symbol;Acc:HGNC:33808]

Gene Synonyms

FLJ41993

Location

Chromosome 22: 49,991,811-50,012,765 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 3 domains and features, is associated with 11158 variant alleles and maps to 361 oligo probes.

Gene

This transcript is a product of gene ENSG00000188263.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000695950.1	IL17REL-202	6507	507aa	ENSP00000512282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS93182	A0A8Q3WKV1	NM_001371417.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENST00000695951.1	IL17REL-203	6440	408aa	ENSP00000512283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS93181	A0A8Q3WLX3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENST00000389983.7	IL17REL-201	6370	38aa	ENSP00000374633.3	Nonsense mediated decay		Q6ZVW7	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 6,440 bps, Translation length: 408 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS93181

Version

ENST00000695951.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000695951.1 IL17REL-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000695951.1 IL17REL-203

Summary

About Us

Get help

Our sister sites

Follow us