Transcript: ENST00000691416.1 LRRIQ4-202

Description

leucine rich repeats and IQ motif containing 4 [Source:HGNC Symbol;Acc:HGNC:34298]

Gene Synonyms

LRRC64

Location

Chromosome 3: 169,813,059-169,833,997 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 43 domains and features, is associated with 9536 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000188306.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000340806.7	LRRIQ4-201	2033	560aa	ENSP00000342188.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46951	A6NIV6	NM_001080460.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000691416.1	LRRIQ4-202	2741	569aa	ENSP00000508855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A8I5KNZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,741 bps, Translation length: 569 residues

Version

ENST00000691416.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000691416.1 LRRIQ4-202

Summary

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Transcript: ENST00000691416.1 LRRIQ4-202

Summary

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