Transcript: ENST00000675259.1 DYNLT4-202

Description

dynein light chain Tctex-type 4 [Source:HGNC Symbol;Acc:HGNC:32315]

Gene Synonyms

TCTEX1D4

Location

Chromosome 1: 44,805,893-44,807,351 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 884 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000188396.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000339355.3	DYNLT4-201	869	221aa	ENSP00000341803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30699	Q5JR98	NM_001377534.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000675259.1	DYNLT4-202	1355	221aa	ENSP00000501642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30699	Q5JR98	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,355 bps, Translation length: 221 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JR98

CCDS

This transcript is a member of the Human CCDS set: CCDS30699

Version

ENST00000675259.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000675259.1 DYNLT4-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000675259.1 DYNLT4-202

Summary

About Us

Get help

Our sister sites

Follow us