Transcript: ENST00000671413.3 SBK1-202

Description

SH3 domain binding kinase 1 [Source:HGNC Symbol;Acc:HGNC:17699]

Gene Synonyms

SBK

Location

Chromosome 16: 28,259,246-28,320,921 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 27335 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000188322.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000341901.5	SBK1-201	4986	424aa	ENSP00000343248.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32416	Q52WX2	NM_001024401.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000671413.3	SBK1-202	1539	512aa	ENSP00000499661.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A590UK17	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,539 bps, Translation length: 512 residues

Version

ENST00000671413.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-ATG start [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000671413.3 SBK1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000671413.3 SBK1-202

Summary

About Us

Get help

Our sister sites

Follow us