Transcript: ENST00000648873.1

Description

novel transcript

Location

About this transcript

This transcript has 13 exons, is annotated with 1 domain and feature, is associated with 34339 variant alleles and maps to 688 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000648873.1	-	5828	774aa	ENSP00000497686.1	Nonsense mediated decay		A0A3B3ITA1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 9, Transcript length: 5,828 bps, Translation length: 774 residues

Version

ENST00000648873.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.