Transcript: ENST00000646685.1 OOSP1-202

Description

oocyte secreted protein 1 [Source:HGNC Symbol;Acc:HGNC:49233]

Location

Chromosome 11: 59,938,432-59,957,480 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 7749 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000284873.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000646685.1	OOSP1-202	795	184aa	ENSP00000493578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS91478	A0A2R8YCH4	NM_001395276.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENST00000644529.1	OOSP1-201	830	200aa	ENSP00000494485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8Y634	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 795 bps, Translation length: 184 residues

MANE

This MANE Select transcript contains ENSP00000493578 and matches to NM_001395276.1 and NP_001382205.1

CCDS

This transcript is a member of the Human CCDS set: CCDS91478

Version

ENST00000646685.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000646685.1 OOSP1-202

Summary

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Transcript: ENST00000646685.1 OOSP1-202

Summary

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