Transcript: ENST00000642529.1 ZNF718-203

Description

zinc finger protein 718 [Source:HGNC Symbol;Acc:HGNC:26889]

Gene Synonyms

FLJ90036

Location

Chromosome 4: 124,501-202,303 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 33788 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSG00000250312.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000510175.6	ZNF718-201	3647	478aa	ENSP00000480556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS75078	Q3SXZ3-1	NM_001039127.6	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000609714.1	ZNF718-202	2772	446aa	ENSP00000476435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS75079	Q3SXZ3-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000642529.1	ZNF718-203	1199	84aa	ENSP00000494096.1	Nonsense mediated decay		A0A2R8Y4V3	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,199 bps, Translation length: 84 residues

Version

ENST00000642529.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000642529.1 ZNF718-203

Summary

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Transcript: ENST00000642529.1 ZNF718-203

Summary

About Us

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