Human (GRCh38.p14)
Description

sodium voltage-gated channel alpha subunit 9 [Source:HGNC Symbol;Acc:HGNC:10597]

Gene Synonyms

ETHA, NAV1.7, NE-NA, NENA, PN1

About this transcript

This transcript has 27 exons, is annotated with 143 domains and features, is associated with 79947 variant alleles and maps to 950 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000642356.2SCN9A-20697521988aaENSP00000495601.1
 
Protein coding
CCDS92892Q15858-1 NM_001365536.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000409672.5SCN9A-20297681977aaENSP00000386306.1
 
Protein coding
CCDS46441Q15858-3 -GENCODE basicTSL:5
ENST00000303354.11SCN9A-20196981988aaENSP00000304748.7
 
Protein coding
CCDS92892Q15858-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000645907.1SCN9A-21073921977aaENSP00000495983.1
 
Protein coding
Q15858-4 -GENCODE basic
ENST00000454569.6SCN9A-2043231832aaENSP00000413212.2
 
Protein coding
A0A0C4DG82 -GENCODE basicTSL:1
ENST00000452182.2SCN9A-2031473378aaENSP00000393141.2
 
Protein coding
H7C064 -TSL:1CDS 3' incomplete
ENST00000645283.1SCN9A-2081097194aaENSP00000496086.1
 
Protein coding
A0A2R8Y7G0 -CDS 5' incomplete
ENST00000667201.2SCN9A-2122255645aaENSP00000499341.2
 
Nonsense mediated decay
A0A590UJB2 -CDS 5' incomplete
ENST00000643319.1SCN9A-207587118aaENSP00000494071.1
 
Nonsense mediated decay
A0A2R8YCX9 -CDS 5' incomplete
ENST00000667991.1SCN9A-21352788aaENSP00000499663.1
 
Nonsense mediated decay
A0A590UK23 --
ENST00000646694.1SCN9A-2112717No protein-
 
Retained intron
---
ENST00000472119.2SCN9A-2052283No protein-
 
Retained intron
--TSL:2
ENST00000645815.1SCN9A-2092188No protein-
 
Retained intron
---
Statistics

Exons: 27, Coding exons: 26, Transcript length: 9,752 bps, Translation length: 1,988 residues

MANE

This MANE Select transcript contains ENSP00000495601 and matches to NM_001365536.1 and NP_001352465.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15858

CCDS

This transcript is a member of the Human CCDS set: CCDS92892

Version

ENST00000642356.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.