Transcript: ENST00000633214.2 OVOL3-202

Description

ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGNC:14186]

Gene Synonyms

HOVO3

Location

Chromosome 19: 36,111,143-36,113,711 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features, is associated with 1441 variant alleles and maps to 294 oligo probes.

Gene

This transcript is a product of gene ENSG00000105261.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000633214.2	OVOL3-202	683	190aa	ENSP00000487603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS82333	A0A0J9YVN9	NM_001302757.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000585332.3	OVOL3-201	695	214aa	ENSP00000465620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00110	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 683 bps, Translation length: 190 residues

MANE

This MANE Select transcript contains ENSP00000487603 and matches to NM_001302757.2 and NP_001289686.1

CCDS

This transcript is a member of the Human CCDS set: CCDS82333

Transcript Support Level (TSL)

TSL:5

Version

ENST00000633214.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000633214.2 OVOL3-202

Summary

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Transcript: ENST00000633214.2 OVOL3-202

Summary

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