Human (GRCh38.p14)
Description

PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767]

Gene Synonyms

ALP

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 13739 variant alleles and maps to 299 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000284767.12PDLIM3-2012802364aaENSP00000284767.8
 
Protein coding
CCDS3844Q53GG5-1 NM_014476.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000284771.7PDLIM3-2032658316aaENSP00000284771.6
 
Protein coding
CCDS47172Q53GG5-2 -GENCODE basicAPPRIS P2TSL:1
ENST00000284770.10PDLIM3-2021264197aaENSP00000284770.5
 
Protein coding
CCDS75218A0A2U3TZH4 -GENCODE basicTSL:1
ENST00000620787.5PDLIM3-2121108276aaENSP00000481771.2
 
Protein coding
CCDS75219A0A087WYF8 -GENCODE basicTSL:4
ENST00000643009.1PDLIM3-2131948130aaENSP00000495411.1
 
Nonsense mediated decay
A0A2R8Y6L7 -CDS 5' incomplete
ENST00000512293.1PDLIM3-20758142aaENSP00000421972.1
 
Nonsense mediated decay
D6RAF1 -TSL:3
ENST00000505886.5PDLIM3-20657142aaENSP00000425138.1
 
Nonsense mediated decay
D6RAF1 -TSL:4
ENST00000514142.5PDLIM3-2095137No protein-
 
Retained intron
--TSL:1
ENST00000504011.5PDLIM3-2042819No protein-
 
Retained intron
--TSL:1
ENST00000514308.3PDLIM3-210906No protein-
 
Retained intron
--TSL:2
ENST00000512380.1PDLIM3-208764No protein-
 
Retained intron
--TSL:2
ENST00000515261.1PDLIM3-211622No protein-
 
Retained intron
--TSL:2
ENST00000504355.5PDLIM3-205510No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,108 bps, Translation length: 276 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS75219

Transcript Support Level (TSL)

TSL:4

Version

ENST00000620787.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.