Human (GRCh38.p14)
Description

CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]

Gene Synonyms

CLIP, CLIP-170, CLIP170, CYLN1, RSN

About this transcript

This transcript has 26 exons, is annotated with 67 domains and features, is associated with 68085 variant alleles and maps to 933 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000620786.5CLIP1-21959781438aaENSP00000479322.1
 
Protein coding
CCDS58285P30622-3 NM_001247997.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000358808.6CLIP1-20258801427aaENSP00000351665.2
 
Protein coding
CCDS9232P30622-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000302528.11CLIP1-20158331427aaENSP00000303585.7
 
Protein coding
CCDS9232P30622-1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000361654.8CLIP1-20355681316aaENSP00000355314.4
 
Protein coding
J3KP58 -GENCODE basicTSL:5
ENST00000537178.5CLIP1-21052291392aaENSP00000445531.1
 
Protein coding
CCDS9233P30622-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000545889.6CLIP1-21846331063aaENSP00000438743.2
 
Protein coding
F5H0N7 -TSL:5CDS 5' incomplete
ENST00000537123.2CLIP1-2092601867aaENSP00000497285.1
 
Protein coding
A0A3B3ISJ8 -TSL:NACDS 5' and 3' incomplete
ENST00000648993.1CLIP1-2202590791aaENSP00000497665.1
 
Protein coding
A0A3B3ITA2 -CDS 5' incomplete
ENST00000540304.6CLIP1-2132552802aaENSP00000437786.2
 
Protein coding
F5H6A0 -TSL:5CDS 3' incomplete
ENST00000535290.5CLIP1-206665108aaENSP00000439472.1
 
Protein coding
F5H270 -TSL:2CDS 3' incomplete
ENST00000539080.1CLIP1-21256083aaENSP00000445387.1
 
Protein coding
F5H367 -TSL:4CDS 3' incomplete
ENST00000541108.1CLIP1-2151658350aaENSP00000446379.1
 
Nonsense mediated decay
F5H1T5 -TSL:1
ENST00000536634.6CLIP1-207927107aaENSP00000497101.1
 
Nonsense mediated decay
A0A3B3IS27 -TSL:3CDS 5' incomplete
ENST00000540539.5CLIP1-2142592No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000514271.2CLIP1-2053493No protein-
 
Retained intron
--TSL:2
ENST00000538120.5CLIP1-2112472No protein-
 
Retained intron
--TSL:3
ENST00000501271.2CLIP1-2042426No protein-
 
Retained intron
--TSL:2
ENST00000541410.1CLIP1-2162379No protein-
 
Retained intron
--TSL:1
ENST00000543205.1CLIP1-2172018No protein-
 
Retained intron
--TSL:2
ENST00000537004.5CLIP1-2082000No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 26, Coding exons: 25, Transcript length: 5,978 bps, Translation length: 1,438 residues

MANE

This MANE Select transcript contains ENSP00000479322 and matches to NM_001247997.2 and NP_001234926.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30622

CCDS

This transcript is a member of the Human CCDS set: CCDS58285

Transcript Support Level (TSL)

TSL:5

Version

ENST00000620786.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.