Transcript: ENST00000615129.4 IQCA1L-203

Description

IQ motif containing with AAA domain 1 like [Source:HGNC Symbol;Acc:HGNC:22831]

Gene Synonyms

IQCA1P1, TCAG_9762

Location

Chromosome 7: 151,190,873-151,205,496 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features, is associated with 6642 variant alleles and maps to 757 oligo probes.

Gene

This transcript is a product of gene ENSG00000278685.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000615129.4	IQCA1L-203	2606	818aa	ENSP00000482119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS78288	A6NCM1	NM_001304419.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000613681.1	IQCA1L-202	738	118aa	ENSP00000484243.1	Nonsense mediated decay		A0A087X1I9	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000611102.1	IQCA1L-201	633	121aa	ENSP00000479307.1	Nonsense mediated decay		A0A087WVA7	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,606 bps, Translation length: 818 residues

MANE

This MANE Select transcript contains ENSP00000482119 and matches to NM_001304419.2 and NP_001291348.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NCM1

CCDS

This transcript is a member of the Human CCDS set: CCDS78288

Transcript Support Level (TSL)

TSL:5

Version

ENST00000615129.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000615129.4 IQCA1L-203

Summary

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Transcript: ENST00000615129.4 IQCA1L-203

Summary

About Us

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