Human (GRCh38.p14)
Description

ALMS1 centrosome and basal body associated protein [Source:HGNC Symbol;Acc:HGNC:428]

Gene Synonyms

KIAA0328

Location
About this transcript

This transcript has 23 exons, is annotated with 92 domains and features, is associated with 108572 variant alleles and maps to 819 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000613296.6ALMS1-205128444168aaENSP00000482968.1
 
Protein coding
CCDS42697Q8TCU4-1 NM_001378454.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000484298.5ALMS1-203125954126aaENSP00000478155.1
 
Protein coding
A0A087WTU9 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000682859.1ALMS1-215124274041aaENSP00000508222.1
 
Protein coding
A0A804HL70 -CDS 5' incomplete
ENST00000684548.1ALMS1-223122274065aaENSP00000507421.1
 
Protein coding
A0A804HJA5 -CDS 5' incomplete
ENST00000682801.1ALMS1-214118603852aaENSP00000507862.1
 
Protein coding
A0A804HKC0 -CDS 5' incomplete
ENST00000614410.4ALMS1-206117003859aaENSP00000479094.1
 
Protein coding
A0A087WV20 -GENCODE basicTSL:5
ENST00000684460.1ALMS1-22296923135aaENSP00000506991.1
 
Protein coding
A0A804HIB7 -CDS 5' incomplete
ENST00000684590.1ALMS1-22468742190aaENSP00000507376.1
 
Protein coding
A0A804HJ69 -CDS 5' incomplete
ENST00000651057.1ALMS1-2082749886aaENSP00000498504.1
 
Protein coding
A0A494C0F1 -CDS 5' incomplete
ENST00000682565.1ALMS1-212124284005aaENSP00000507671.1
 
Nonsense mediated decay
A0A804HJW3 -CDS 5' incomplete
ENST00000684656.1ALMS1-22598582858aaENSP00000508012.1
 
Nonsense mediated decay
A0A804HKP4 -CDS 5' incomplete
ENST00000683791.1ALMS1-2195497216aaENSP00000506916.1
 
Nonsense mediated decay
A0A804HI60 -CDS 5' incomplete
ENST00000423048.5ALMS1-20151941023aaENSP00000399833.1
 
Nonsense mediated decay
H7C1D9 -TSL:1CDS 5' incomplete
ENST00000651434.1ALMS1-2094537312aaENSP00000498259.1
 
Nonsense mediated decay
A0A494BZW1 -CDS 5' incomplete
ENST00000652487.1ALMS1-2113687901aaENSP00000499118.1
 
Nonsense mediated decay
A0A494C1N9 -CDS 5' incomplete
ENST00000651750.1ALMS1-2101661428aaENSP00000498307.1
 
Nonsense mediated decay
A0A494C003 -CDS 5' incomplete
ENST00000682889.1ALMS1-2161570No protein-
 
Protein coding CDS not defined
---
ENST00000464408.3ALMS1-202640No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000490821.1ALMS1-204578No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000620466.4ALMS1-2076720No protein-
 
Retained intron
--TSL:2
ENST00000683147.1ALMS1-2183855No protein-
 
Retained intron
---
ENST00000684148.1ALMS1-2203775No protein-
 
Retained intron
---
ENST00000684197.1ALMS1-2213258No protein-
 
Retained intron
---
ENST00000682675.1ALMS1-2131268No protein-
 
Retained intron
---
ENST00000683108.1ALMS1-217256No protein-
 
Retained intron
---
Statistics

Exons: 23, Coding exons: 23, Transcript length: 12,844 bps, Translation length: 4,168 residues

MANE

This MANE Select transcript contains ENSP00000482968 and matches to NM_001378454.1 and NP_001365383.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TCU4

CCDS

This transcript is a member of the Human CCDS set: CCDS42697

Transcript Support Level (TSL)

TSL:1

Version

ENST00000613296.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.