Transcript: ENST00000609293.2 LINC01990-201

Description

long intergenic non-protein coding RNA 1990 [Source:HGNC Symbol;Acc:HGNC:52822]

Location

About this transcript

This transcript has 3 exons, is associated with 12916 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000609293.2	LINC01990-201	1525	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000658914.1	LINC01990-202	889	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000664038.1	LINC01990-203	710	No protein	-	lncRNA	-	-
ENST00000665848.1	LINC01990-204	650	No protein	-	lncRNA	-	-
ENST00000667329.1	LINC01990-205	568	No protein	-	lncRNA	-	-
ENST00000669596.1	LINC01990-206	522	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,525 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000609293.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.