Transcript: ENST00000607593.1 LINC00551-201

Description

long intergenic non-protein coding RNA 551 [Source:HGNC Symbol;Acc:HGNC:43691]

Location

Chromosome 13: 106,617,810-106,631,359 forward strand.

About this transcript

This transcript has 4 exons, is associated with 5330 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSG00000272274.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663663.1	LINC00551-204	2666	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000607593.1	LINC00551-201	1668	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000665026.1	LINC00551-205	1361	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000661468.1	LINC00551-203	1361	No protein	-	lncRNA	-	-
ENST00000653952.1	LINC00551-202	1085	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000690745.1	LINC00551-207	948	No protein	-	lncRNA	-	-
ENST00000700965.1	LINC00551-208	805	No protein	-	lncRNA	-	-
ENST00000667614.1	LINC00551-206	546	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,668 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000607593.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000607593.1 LINC00551-201

Summary

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Transcript: ENST00000607593.1 LINC00551-201

Summary

About Us

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