Transcript: ENST00000580650.1 AKAIN1-202

Description

A-kinase anchor inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:28285]

Gene Synonyms

C18ORF42

Location

Chromosome 18: 5,145,285-5,197,503 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 21669 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSG00000231824.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000434239.4	AKAIN1-201	3065	69aa	ENSP00000399075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54179	P0CW23	NM_001145194.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000580650.1	AKAIN1-202	523	76aa	ENSP00000462259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS82235	J3KS16	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 523 bps, Translation length: 76 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS82235

Transcript Support Level (TSL)

TSL:3

Version

ENST00000580650.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000580650.1 AKAIN1-202

Summary

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Transcript: ENST00000580650.1 AKAIN1-202

Summary

About Us

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