Transcript: ENST00000575094.5

Description

novel transcript

Location

Chromosome 12: 9,648,047-9,658,412 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4278 variant alleles and maps to 571 oligo probes.

Gene

This transcript is a product of gene ENSG00000291107.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000575094.5	-	2612	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000689503.2	-	1617	No protein	-	lncRNA	-	-
ENST00000545363.6	-	805	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000574035.5	-	587	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,612 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000575094.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000575094.5

Summary

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Transcript: ENST00000575094.5

Summary

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