Transcript: ENST00000562573.2 TMEM202-AS1-201

Description

TMEM202 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:53265]

Location

Chromosome 15: 72,406,416-72,474,250 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 29641 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000261423.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000562573.2	TMEM202-AS1-201	1223	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000565181.1	TMEM202-AS1-202	2325	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000734718.1	TMEM202-AS1-222	1480	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734708.1	TMEM202-AS1-212	1223	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734714.1	TMEM202-AS1-218	1032	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734728.1	TMEM202-AS1-232	1031	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734720.1	TMEM202-AS1-224	1005	No protein	-	lncRNA	-	-
ENST00000734719.1	TMEM202-AS1-223	927	No protein	-	lncRNA	-	-
ENST00000734709.1	TMEM202-AS1-213	839	No protein	-	lncRNA	-	-
ENST00000734715.1	TMEM202-AS1-219	800	No protein	-	lncRNA	-	-
ENST00000734727.1	TMEM202-AS1-231	800	No protein	-	lncRNA	-	-
ENST00000734726.1	TMEM202-AS1-230	799	No protein	-	lncRNA	-	-
ENST00000734701.1	TMEM202-AS1-205	772	No protein	-	lncRNA	-	-
ENST00000701237.2	TMEM202-AS1-203	757	No protein	-	lncRNA	-	-
ENST00000734710.1	TMEM202-AS1-214	749	No protein	-	lncRNA	-	-
ENST00000734704.1	TMEM202-AS1-208	745	No protein	-	lncRNA	-	-
ENST00000734706.1	TMEM202-AS1-210	742	No protein	-	lncRNA	-	-
ENST00000734733.1	TMEM202-AS1-237	736	No protein	-	lncRNA	-	-
ENST00000734721.1	TMEM202-AS1-225	726	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734725.1	TMEM202-AS1-229	718	No protein	-	lncRNA	-	-
ENST00000734712.1	TMEM202-AS1-216	708	No protein	-	lncRNA	-	-
ENST00000734731.1	TMEM202-AS1-235	705	No protein	-	lncRNA	-	-
ENST00000734711.1	TMEM202-AS1-215	704	No protein	-	lncRNA	-	-
ENST00000734722.1	TMEM202-AS1-226	699	No protein	-	lncRNA	-	-
ENST00000734730.1	TMEM202-AS1-234	691	No protein	-	lncRNA	-	-
ENST00000734716.1	TMEM202-AS1-220	687	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701684.1	TMEM202-AS1-204	669	No protein	-	lncRNA	-	-
ENST00000734723.1	TMEM202-AS1-227	659	No protein	-	lncRNA	-	-
ENST00000734705.1	TMEM202-AS1-209	639	No protein	-	lncRNA	-	-
ENST00000734707.1	TMEM202-AS1-211	632	No protein	-	lncRNA	-	-
ENST00000734713.1	TMEM202-AS1-217	603	No protein	-	lncRNA	-	-
ENST00000734724.1	TMEM202-AS1-228	557	No protein	-	lncRNA	-	-
ENST00000734732.1	TMEM202-AS1-236	514	No protein	-	lncRNA	-	-
ENST00000734717.1	TMEM202-AS1-221	510	No protein	-	lncRNA	-	-
ENST00000734702.1	TMEM202-AS1-206	461	No protein	-	lncRNA	-	-
ENST00000734703.1	TMEM202-AS1-207	454	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000734735.1	TMEM202-AS1-239	449	No protein	-	lncRNA	-	-
ENST00000734729.1	TMEM202-AS1-233	380	No protein	-	lncRNA	-	-
ENST00000734734.1	TMEM202-AS1-238	366	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,223 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000562573.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000562573.2 TMEM202-AS1-201

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Transcript: ENST00000562573.2 TMEM202-AS1-201

Summary

About Us

Get help

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