Transcript: ENST00000546162.6 ABCC6P1-202

Description

ATP binding cassette subfamily C member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33352]

Location

Chromosome 16: 18,571,188-18,598,328 forward strand.

About this transcript

This transcript has 11 exons, is associated with 11570 variant alleles and maps to 794 oligo probes.

Gene

This transcript is a product of gene ENSG00000291057.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000546162.6	ABCC6P1-202	2943	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000565647.7	ABCC6P1-204	2766	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000701162.1	ABCC6P1-205	2613	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000701691.1	ABCC6P1-206	1375	No protein	-	lncRNA	-	-
ENST00000565118.2	ABCC6P1-203	813	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 2,943 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000546162.6

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000546162.6 ABCC6P1-202

Summary

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Transcript: ENST00000546162.6 ABCC6P1-202

Summary

About Us

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