Human (GRCh38.p14)
Description

VPS35 endosomal protein sorting factor like [Source:HGNC Symbol;Acc:HGNC:24641]

Gene Synonyms

C16ORF62, MGC16824

Location
About this transcript

This transcript has 28 exons, is annotated with 6 domains and features, is associated with 62705 variant alleles and maps to 615 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000417362.7VPS35L-2023606963aaENSP00000395973.3
 
Protein coding
CCDS32397Q7Z3J2-1 NM_020314.7MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000251143.9VPS35L-20138941052aaENSP00000251143.6
 
Protein coding
E7EWW0 -GENCODE basicTSL:1
ENST00000543152.5VPS35L-2143352712aaENSP00000457973.1
 
Protein coding
H3BV68 -GENCODE basicTSL:1
ENST00000542263.5VPS35L-2133138870aaENSP00000442468.2
 
Protein coding
F5H7K1 -GENCODE basicTSL:2
ENST00000513947.8VPS35L-2032501451aaENSP00000458116.3
 
Protein coding
H3BVG8 -GENCODE basicTSL:1
ENST00000542027.3VPS35L-2121841116aaENSP00000457779.2
 
Protein coding
H3BUS7 -TSL:5CDS 5' incomplete
ENST00000563649.1VPS35L-22058673aaENSP00000457190.1
 
Protein coding
H3BTI5 -TSL:5CDS 5' incomplete
ENST00000567245.5VPS35L-222573168aaENSP00000455045.2
 
Protein coding
H3BNX2 -GENCODE basicTSL:5
ENST00000544670.5VPS35L-21757095aaENSP00000456425.1
 
Protein coding
H3BRV8 -TSL:5CDS 3' incomplete
ENST00000538552.5VPS35L-20655295aaENSP00000459108.1
 
Protein coding
I3L1U5 -TSL:2CDS 3' incomplete
ENST00000539322.5VPS35L-2071300273aaENSP00000438852.1
 
Nonsense mediated decay
F6S1J4 -TSL:5
ENST00000537186.6VPS35L-20552040aaENSP00000438557.3
 
Nonsense mediated decay
H0YFG6 -TSL:4
ENST00000544275.1VPS35L-216566No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000562446.1VPS35L-219541No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000540101.2VPS35L-209461No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000566850.1VPS35L-2211016No protein-
 
Retained intron
--TSL:2
ENST00000540240.1VPS35L-210633No protein-
 
Retained intron
--TSL:3
ENST00000535164.5VPS35L-204564No protein-
 
Retained intron
--TSL:4
ENST00000539705.5VPS35L-208564No protein-
 
Retained intron
--TSL:4
ENST00000543460.1VPS35L-215557No protein-
 
Retained intron
--TSL:2
ENST00000541153.5VPS35L-211542No protein-
 
Retained intron
--TSL:4
ENST00000546175.5VPS35L-218479No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 28, Coding exons: 28, Transcript length: 3,138 bps, Translation length: 870 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000542263.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.