Transcript: ENST00000539203.2 GPR83-202

Description

G protein-coupled receptor 83 [Source:HGNC Symbol;Acc:HGNC:4523]

Gene Synonyms

GPR72

Location

Chromosome 11: 94,379,531-94,401,392 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 21 domains and features, is associated with 11611 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000123901.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000243673.7	GPR83-201	4277	423aa	ENSP00000243673.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8297	Q9NYM4-1	NM_016540.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000539203.2	GPR83-202	1909	381aa	ENSP00000441550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS81616	Q9NYM4-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,909 bps, Translation length: 381 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NYM4

CCDS

This transcript is a member of the Human CCDS set: CCDS81616

Transcript Support Level (TSL)

TSL:5

Version

ENST00000539203.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

dotter confirmed

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000539203.2 GPR83-202

Summary

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Transcript: ENST00000539203.2 GPR83-202

Summary

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