Transcript: ENST00000538173.2 EIF2S3B-202

Description

eukaryotic translation initiation factor 2 subunit gamma B [Source:HGNC Symbol;Acc:HGNC:43863]

Gene Synonyms

EIF-2-GAMMA2, EIF2GA

Location

Chromosome 12: 10,505,890-10,508,525 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 19 domains and features, is associated with 1483 variant alleles and maps to 391 oligo probes.

Gene

This transcript is a product of gene ENSG00000180574.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000538173.2	EIF2S3B-202	2636	472aa	ENSP00000445077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS91654	Q2VIR3-1	NM_001357734.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000322446.3	EIF2S3B-201	2142	466aa	ENSP00000323063.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS86282	Q2VIR3-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,636 bps, Translation length: 472 residues

MANE

This MANE Select transcript contains ENSP00000445077 and matches to NM_001357734.3 and NP_001344663.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2VIR3

CCDS

This transcript is a member of the Human CCDS set: CCDS91654

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000538173.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000538173.2 EIF2S3B-202

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Transcript: ENST00000538173.2 EIF2S3B-202

Summary

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