Transcript: ENST00000535058.1 LINC02389-201

Description

long intergenic non-protein coding RNA 2389 [Source:HGNC Symbol;Acc:HGNC:53316]

Gene Synonyms

FLJ41278

Location

Chromosome 12: 64,883,394-64,977,522 forward strand.

About this transcript

This transcript has 3 exons, is associated with 36771 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000255693.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000662789.1	LINC02389-211	1864	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000535058.1	LINC02389-201	3546	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000654555.1	LINC02389-207	3468	No protein	-	lncRNA	-	-
ENST00000655129.1	LINC02389-208	3195	No protein	-	lncRNA	-	-
ENST00000653464.1	LINC02389-205	2403	No protein	-	lncRNA	-	-
ENST00000649369.1	LINC02389-203	1869	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000661511.1	LINC02389-210	1772	No protein	-	lncRNA	-	-
ENST00000661071.1	LINC02389-209	1749	No protein	-	lncRNA	-	-
ENST00000665647.1	LINC02389-212	1682	No protein	-	lncRNA	-	-
ENST00000653132.1	LINC02389-204	1631	No protein	-	lncRNA	-	-
ENST00000667999.1	LINC02389-213	1628	No protein	-	lncRNA	-	-
ENST00000671328.1	LINC02389-214	1595	No protein	-	lncRNA	-	-
ENST00000653818.1	LINC02389-206	1582	No protein	-	lncRNA	-	-
ENST00000540024.1	LINC02389-202	557	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,546 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000535058.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000535058.1 LINC02389-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000535058.1 LINC02389-201

Summary

About Us

Get help

Our sister sites

Follow us