Transcript: ENST00000522781.6 INSYN2A-202

Description

inhibitory synaptic factor 2A [Source:HGNC Symbol;Acc:HGNC:33859]

Gene Synonyms

C10ORF141, FAM196A, FLJ45557, INSYN2

Location

Chromosome 10: 127,135,430-127,196,591 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 26893 variant alleles and maps to 385 oligo probes.

Gene

This transcript is a product of gene ENSG00000188916.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000522781.6	INSYN2A-202	4836	479aa	ENSP00000429763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31312	Q6ZSG2-1	NM_001039762.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000614311.4	INSYN2A-203	4335	455aa	ENSP00000479733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZSG2-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000424811.2	INSYN2A-201	3149	455aa	ENSP00000428730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZSG2-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 4,836 bps, Translation length: 479 residues

MANE

This MANE Select transcript contains ENSP00000429763 and matches to NM_001039762.3 and NP_001034851.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZSG2

CCDS

This transcript is a member of the Human CCDS set: CCDS31312

Transcript Support Level (TSL)

TSL:2

Version

ENST00000522781.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000522781.6 INSYN2A-202

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Transcript: ENST00000522781.6 INSYN2A-202

Summary

About Us

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