Human (GRCh38.p14)
Description

lung cancer associated transcript 1 [Source:HGNC Symbol;Acc:HGNC:48498]

Gene Synonyms

SCAL1, SCAT5

Location
About this transcript

This transcript has 4 exons, is associated with 4721 variant alleles and maps to 191 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000650150.1LUCAT1-2491357No protein-
 
lncRNA
-Ensembl Canonical
ENST00000513626.3LUCAT1-2033072No protein-
 
lncRNA
-GENCODE basicTSL:2
ENST00000647761.1LUCAT1-2073056No protein-
 
lncRNA
-GENCODE basic
ENST00000648822.1LUCAT1-2242666No protein-
 
lncRNA
-GENCODE basic
ENST00000650017.1LUCAT1-2442176No protein-
 
lncRNA
--
ENST00000649539.1LUCAT1-2352059No protein-
 
lncRNA
--
ENST00000650067.1LUCAT1-2462024No protein-
 
lncRNA
--
ENST00000648075.1LUCAT1-2111977No protein-
 
lncRNA
--
ENST00000649702.1LUCAT1-2371972No protein-
 
lncRNA
--
ENST00000650004.1LUCAT1-2421913No protein-
 
lncRNA
-GENCODE basic
ENST00000649304.1LUCAT1-2281773No protein-
 
lncRNA
--
ENST00000650273.1LUCAT1-2511757No protein-
 
lncRNA
--
ENST00000649969.1LUCAT1-2391711No protein-
 
lncRNA
-GENCODE basic
ENST00000648597.1LUCAT1-2181687No protein-
 
lncRNA
--
ENST00000670581.1LUCAT1-2611614No protein-
 
lncRNA
--
ENST00000648310.1LUCAT1-2141505No protein-
 
lncRNA
-GENCODE basic
ENST00000649467.1LUCAT1-2341498No protein-
 
lncRNA
--
ENST00000650008.1LUCAT1-2431457No protein-
 
lncRNA
-GENCODE basic
ENST00000649654.1LUCAT1-2361407No protein-
 
lncRNA
--
ENST00000668775.1LUCAT1-2601359No protein-
 
lncRNA
--
ENST00000649392.2LUCAT1-2301347No protein-
 
lncRNA
--
ENST00000650100.1LUCAT1-2481337No protein-
 
lncRNA
--
ENST00000648923.1LUCAT1-2261300No protein-
 
lncRNA
--
ENST00000650583.1LUCAT1-2551278No protein-
 
lncRNA
-GENCODE basic
ENST00000648031.1LUCAT1-2101260No protein-
 
lncRNA
--
ENST00000648905.1LUCAT1-2251227No protein-
 
lncRNA
--
ENST00000649138.1LUCAT1-2271222No protein-
 
lncRNA
--
ENST00000650003.1LUCAT1-2411212No protein-
 
lncRNA
--
ENST00000647807.1LUCAT1-2081204No protein-
 
lncRNA
--
ENST00000649405.1LUCAT1-2311179No protein-
 
lncRNA
--
ENST00000649447.2LUCAT1-2331173No protein-
 
lncRNA
--
ENST00000648439.1LUCAT1-2161149No protein-
 
lncRNA
--
ENST00000648137.2LUCAT1-2121145No protein-
 
lncRNA
--
ENST00000650047.1LUCAT1-2451080No protein-
 
lncRNA
-GENCODE basic
ENST00000648683.1LUCAT1-2201045No protein-
 
lncRNA
--
ENST00000648811.1LUCAT1-2231043No protein-
 
lncRNA
-GENCODE basic
ENST00000647745.1LUCAT1-2051042No protein-
 
lncRNA
--
ENST00000650321.1LUCAT1-2521012No protein-
 
lncRNA
--
ENST00000648773.1LUCAT1-2221007No protein-
 
lncRNA
--
ENST00000660484.1LUCAT1-2581004No protein-
 
lncRNA
--
ENST00000653155.1LUCAT1-256991No protein-
 
lncRNA
--
ENST00000650261.1LUCAT1-250969No protein-
 
lncRNA
--
ENST00000648636.1LUCAT1-219967No protein-
 
lncRNA
--
ENST00000648385.1LUCAT1-215960No protein-
 
lncRNA
-GENCODE basic
ENST00000513492.6LUCAT1-202935No protein-
 
lncRNA
-TSL:5
ENST00000648015.1LUCAT1-209917No protein-
 
lncRNA
--
ENST00000654784.1LUCAT1-257901No protein-
 
lncRNA
--
ENST00000648199.1LUCAT1-213881No protein-
 
lncRNA
--
ENST00000649322.1LUCAT1-229857No protein-
 
lncRNA
--
ENST00000687742.1LUCAT1-263842No protein-
 
lncRNA
--
ENST00000650529.1LUCAT1-254820No protein-
 
lncRNA
--
ENST00000649976.1LUCAT1-240809No protein-
 
lncRNA
-GENCODE basic
ENST00000650381.1LUCAT1-253798No protein-
 
lncRNA
--
ENST00000650098.1LUCAT1-247793No protein-
 
lncRNA
--
ENST00000664701.1LUCAT1-259768No protein-
 
lncRNA
--
ENST00000511918.6LUCAT1-201737No protein-
 
lncRNA
-TSL:3
ENST00000649968.1LUCAT1-238646No protein-
 
lncRNA
--
ENST00000647759.1LUCAT1-206604No protein-
 
lncRNA
--
ENST00000649424.1LUCAT1-232601No protein-
 
lncRNA
--
ENST00000648751.2LUCAT1-221570No protein-
 
lncRNA
--
ENST00000607854.1LUCAT1-204549No protein-
 
lncRNA
-TSL:4
ENST00000690504.1LUCAT1-264518No protein-
 
lncRNA
--
ENST00000690915.1LUCAT1-265464No protein-
 
lncRNA
--
ENST00000685632.1LUCAT1-262409No protein-
 
lncRNA
--
ENST00000648457.1LUCAT1-217374No protein-
 
lncRNA
--
Statistics

Exons: 4, Coding exons: 0, Transcript length: 737 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000511918.6

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]