Transcript: ENST00000499481.2

Description

novel transcript

Location

Chromosome 12: 57,869,835-57,896,482 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 10485 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSG00000245651.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000499481.2	-	3507	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000664926.1	-	1812	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000667552.1	-	1720	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000664759.1	-	1418	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000661247.1	-	1163	No protein	-	lncRNA	-	-
ENST00000661970.1	-	1084	No protein	-	lncRNA	-	-
ENST00000667373.1	-	986	No protein	-	lncRNA	-	-
ENST00000661434.1	-	859	No protein	-	lncRNA	-	-
ENST00000659761.1	-	615	No protein	-	lncRNA	-	-
ENST00000548955.1	-	549	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000656548.1	-	434	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,507 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000499481.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000499481.2

Summary

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Transcript: ENST00000499481.2

Summary

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