Human (GRCh38.p14)
Description

BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]

Gene Synonyms

BRCC1, FANCS, PPP1R53, RNF53

Location
About this transcript

This transcript has 23 exons, is annotated with 1 domain and feature, is associated with 58104 variant alleles and maps to 1168 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357654.9BRCA1-20370881863aaENSP00000350283.3
 
Protein coding
CCDS11453P38398-1 NM_007294.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000618469.2BRCA1-22676131863aaENSP00000478114.2
 
Protein coding
CCDS11453G1UI37 -GENCODE basicAPPRIS P4TSL:1
ENST00000652672.2BRCA1-23273201816aaENSP00000498906.2
 
Protein coding
CCDS11459A0A494C182 --
ENST00000471181.7BRCA1-20972701884aaENSP00000418960.2
 
Protein coding
CCDS11456P38398-7 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000494123.6BRCA1-22171681863aaENSP00000419103.2
 
Protein coding
CCDS11453Q3B891 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000470026.6BRCA1-20871471863aaENSP00000419274.2
 
Protein coding
CCDS11453E7EWN5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000461574.2BRCA1-20570821862aaENSP00000417241.2
 
Protein coding
H0Y850 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000476777.6BRCA1-21270751861aaENSP00000417554.2
 
Protein coding
E7EQW4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000489037.2BRCA1-21670561837aaENSP00000420781.2
 
Protein coding
E7ENB7 -GENCODE basicTSL:4
ENST00000477152.6BRCA1-21370101837aaENSP00000419988.2
 
Protein coding
E9PH68 -GENCODE basicTSL:1
ENST00000634433.2BRCA1-22869911822aaENSP00000489431.2
 
Protein coding
A0A0U1RRA9 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000473961.6BRCA1-21169621821aaENSP00000420201.2
 
Protein coding
H0Y8D8 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000644379.2BRCA1-23063631885aaENSP00000496570.2
 
Protein coding
A0A2R8Y7V5 -GENCODE basicAPPRIS ALT2
ENST00000497488.2BRCA1-22263351567aaENSP00000418986.2
 
Protein coding
C9IZW4 -GENCODE basicTSL:1
ENST00000493795.5BRCA1-21957321816aaENSP00000418775.1
 
Protein coding
CCDS11459P38398-8 -GENCODE basicTSL:5
ENST00000644555.2BRCA1-2313921713aaENSP00000494614.2
 
Protein coding
A0A2R8Y587 -GENCODE basic
ENST00000478531.6BRCA1-2143765759aaENSP00000420412.2
 
Protein coding
E7EUM2 -GENCODE basicTSL:1
ENST00000493919.6BRCA1-2203757713aaENSP00000418819.2
 
Protein coding
B7ZA85 -GENCODE basicTSL:2
ENST00000352993.7BRCA1-2013668721aaENSP00000312236.5
 
Protein coding
P38398-5 -GENCODE basicTSL:5
ENST00000468300.5BRCA1-2073273699aaENSP00000417148.1
 
Protein coding
CCDS11455P38398-6 -GENCODE basicTSL:1
ENST00000484087.6BRCA1-2152490717aaENSP00000419481.2
 
Protein coding
H0Y8B8 -GENCODE basicTSL:5
ENST00000491747.6BRCA1-2172379759aaENSP00000420705.2
 
Protein coding
CCDS11454P38398-3 -GENCODE basicTSL:5
ENST00000700182.1BRCA1-2362269544aaENSP00000514849.1
 
Protein coding
A0A8V8TPY7 -GENCODE basic
ENST00000591534.5BRCA1-2241282354aaENSP00000467329.1
 
Protein coding
K7EPC7 -GENCODE basicTSL:1
ENST00000586385.5BRCA1-223781173aaENSP00000465818.1
 
Protein coding
C6YB45 -GENCODE basicTSL:1
ENST00000591849.5BRCA1-22556396aaENSP00000465347.1
 
Protein coding
K7EJW3 -GENCODE basicTSL:1
ENST00000461221.5BRCA1-204569363aaENSP00000418548.1
 
Nonsense mediated decay
P38398-2 -TSL:1
ENST00000700183.1BRCA1-237177859aaENSP00000514850.1
 
Nonsense mediated decay
E9PC22 --
ENST00000492859.5BRCA1-218158459aaENSP00000420253.1
 
Nonsense mediated decay
E9PC22 -TSL:1
ENST00000642945.1BRCA1-229125581aaENSP00000495897.1
 
Nonsense mediated decay
A0A2R8Y6Y9 --
ENST00000461798.5BRCA1-20658263aaENSP00000417988.1
 
Nonsense mediated decay
P38398-2 -TSL:3
ENST00000700186.1BRCA1-240737No protein-
 
Protein coding CDS not defined
---
ENST00000700185.1BRCA1-239496No protein-
 
Protein coding CDS not defined
---
ENST00000621897.1BRCA1-227375No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000354071.8BRCA1-2024497No protein-
 
Retained intron
--TSL:1
ENST00000700081.1BRCA1-2332851No protein-
 
Retained intron
---
ENST00000700082.1BRCA1-2341653No protein-
 
Retained intron
---
ENST00000700083.1BRCA1-2351309No protein-
 
Retained intron
---
ENST00000700184.1BRCA1-238919No protein-
 
Retained intron
---
ENST00000472490.1BRCA1-210561No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 23, Coding exons: 4, Transcript length: 5,693 bps, Translation length: 63 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P38398

Transcript Support Level (TSL)

TSL:1

Version

ENST00000461221.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.