Transcript: ENST00000457092.6 RNF39-210

Description

ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]

Gene Synonyms

FAP216, HZFW1, LIRF

Location

Scaffold HSCHR6_MHC_SSTO_CTG1: 1,369,185-1,374,768 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features and maps to 1247 oligo probes.

Gene

This transcript is a product of gene ENSG00000230467.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000420562.2	RNF39-209	2206	420aa	ENSP00000387930.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140T901	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000457092.6	RNF39-210	1970	354aa	ENSP00000405340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H2S5-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,970 bps, Translation length: 354 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H2S5

Transcript Support Level (TSL)

TSL:1

Version

ENST00000457092.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000457092.6 RNF39-210

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000457092.6 RNF39-210

Summary

About Us

Get help

Our sister sites

Follow us