Transcript: ENST00000457079.3 LINC00885-201

Description

long intergenic non-protein coding RNA 885 [Source:HGNC Symbol;Acc:HGNC:48571]

Location

About this transcript

This transcript has 3 exons, is associated with 8499 variant alleles and maps to 294 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000457079.3	LINC00885-201	1951	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000689269.1	LINC00885-209	2059	No protein	-	lncRNA	-	-
ENST00000669905.2	LINC00885-206	1755	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000662916.1	LINC00885-205	1724	No protein	-	lncRNA	-	-
ENST00000659409.2	LINC00885-203	1675	No protein	-	lncRNA	-	-
ENST00000670584.2	LINC00885-207	1449	No protein	-	lncRNA	-	-
ENST00000654470.2	LINC00885-202	1246	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000662113.1	LINC00885-204	979	No protein	-	lncRNA	-	-
ENST00000687908.1	LINC00885-208	819	No protein	-	lncRNA	-	-
ENST00000702140.1	LINC00885-210	673	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,951 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000457079.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.