Transcript: ENST00000452774.2 AOC2-202

Description

amine oxidase copper containing 2 [Source:HGNC Symbol;Acc:HGNC:549]

Gene Synonyms

DAO2, RAO

Location

Chromosome 17: 42,844,601-42,850,704 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 25 domains and features, is associated with 3775 variant alleles and maps to 300 oligo probes.

Gene

This transcript is a product of gene ENSG00000131480.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000253799.8	AOC2-201	2677	756aa	ENSP00000253799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11443	O75106-1	NM_009590.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000452774.2	AOC2-202	2572	729aa	ENSP00000406134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45690	O75106-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,572 bps, Translation length: 729 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75106

CCDS

This transcript is a member of the Human CCDS set: CCDS45690

Transcript Support Level (TSL)

TSL:1

Version

ENST00000452774.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000452774.2 AOC2-202

Summary

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Transcript: ENST00000452774.2 AOC2-202

Summary

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