Human (GRCh38.p14)
Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]

Gene Synonyms

ATX, KIAA0421, LIP

Location
About this transcript

This transcript has 63 exons, is annotated with 58 domains and features, is associated with 59153 variant alleles and maps to 5373 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000446231.7SMG1-201160623661aaENSP00000402515.3
 
Protein coding
CCDS45430Q96Q15-1 NM_015092.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000565324.5SMG1-210124653551aaENSP00000456259.1
 
Protein coding
J3KRA9 -TSL:1CDS 5' incomplete
ENST00000563235.5SMG1-2062910853aaENSP00000455861.2
 
Protein coding
H3BQN7 -TSL:2CDS 5' incomplete
ENST00000561947.5SMG1-2042664551aaENSP00000460854.1
 
Protein coding
I3L400 -TSL:5CDS 5' incomplete
ENST00000565224.5SMG1-2092372607aaENSP00000458380.1
 
Protein coding
I3L0W2 -GENCODE basicTSL:5
ENST00000532700.6SMG1-2021259335aaENSP00000432825.2
 
Protein coding
E9PNP6 -TSL:2CDS 3' incomplete
ENST00000563836.1SMG1-20856556aaENSP00000456025.1
 
Protein coding
H3BR09 -TSL:5CDS 3' incomplete
ENST00000569122.1SMG1-21556262aaENSP00000455453.2
 
Protein coding
H3BPS6 -TSL:5CDS 3' incomplete
ENST00000566328.2SMG1-21155085aaENSP00000484278.1
 
Protein coding
A0A087X1K8 -TSL:5CDS 5' incomplete
ENST00000568038.1SMG1-2131210321aaENSP00000458558.1
 
Nonsense mediated decay
I3L144 -TSL:2CDS 5' incomplete
ENST00000567737.1SMG1-212721No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000569764.1SMG1-2164187No protein-
 
Retained intron
--TSL:5
ENST00000568239.1SMG1-2142978No protein-
 
Retained intron
--TSL:1
ENST00000563448.1SMG1-2072016No protein-
 
Retained intron
--TSL:2
ENST00000561940.1SMG1-203964No protein-
 
Retained intron
--TSL:2
ENST00000562668.1SMG1-205449No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 63, Coding exons: 63, Transcript length: 16,062 bps, Translation length: 3,661 residues

MANE

This MANE Select transcript contains ENSP00000402515 and matches to NM_015092.5 and NP_055907.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96Q15

CCDS

This transcript is a member of the Human CCDS set: CCDS45430

Transcript Support Level (TSL)

TSL:1

Version

ENST00000446231.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.