Human (GRCh38.p14)
Description

VPS52 subunit of GARP complex [Source:HGNC Symbol;Acc:HGNC:10518]

Gene Synonyms

ARE1, SACM2L

Location
About this transcript

This transcript has 20 exons, is annotated with 6 domains and features, is associated with 9356 variant alleles and maps to 2587 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000445902.3VPS52-2122936723aaENSP00000409952.2
 
Protein coding
CCDS4770Q8N1B4-1 NM_022553.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000482399.5VPS52-218333888aaENSP00000436612.1
 
Protein coding
E9PI03 -GENCODE basicTSL:2
ENST00000478934.5VPS52-2172602No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000464425.1VPS52-2151060No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000463486.5VPS52-214925No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000493674.5VPS52-220878No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000495981.5VPS52-222743No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000471309.1VPS52-216505No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000493379.1VPS52-219786No protein-
 
Retained intron
--TSL:5
ENST00000461743.1VPS52-213547No protein-
 
Retained intron
--TSL:3
ENST00000495755.1VPS52-221453No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,936 bps, Translation length: 723 residues

MANE

This MANE Select transcript contains ENSP00000409952 and matches to NM_022553.6 and NP_072047.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N1B4

CCDS

This transcript is a member of the Human CCDS set: CCDS4770

Transcript Support Level (TSL)

TSL:1

Version

ENST00000445902.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.