Transcript: ENST00000444297.2 NT5C1B-RDH14-201

Description

NT5C1B-RDH14 readthrough [Source:HGNC Symbol;Acc:HGNC:38831]

Location

Chromosome 2: 18,555,545-18,589,564 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 14998 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000250741.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000532967.5	NT5C1B-RDH14-202	2142	602aa	ENSP00000433415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000444297.2	NT5C1B-RDH14-201	1695	533aa	ENSP00000412639.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2C7	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,695 bps, Translation length: 533 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000444297.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENST00000444297.2 NT5C1B-RDH14-201

Summary

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Transcript: ENST00000444297.2 NT5C1B-RDH14-201

Summary

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