Transcript: ENST00000442684.2

Description

novel transcript

Location

Chromosome 1: 207,179,247-207,184,067 forward strand.

About this transcript

This transcript has 4 exons and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSG00000243636.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000740758.1	-	1036	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000740765.1	-	1803	No protein	-	lncRNA	-	-
ENST00000740766.1	-	1783	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740764.1	-	1630	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740760.1	-	1244	No protein	-	lncRNA	-	-
ENST00000740771.1	-	1139	No protein	-	lncRNA	-	-
ENST00000740770.1	-	1071	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740762.1	-	1025	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000442684.2	-	999	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000740772.1	-	948	No protein	-	lncRNA	-	-
ENST00000740761.1	-	917	No protein	-	lncRNA	-	-
ENST00000740769.1	-	914	No protein	-	lncRNA	-	-
ENST00000740768.1	-	816	No protein	-	lncRNA	-	-
ENST00000740759.1	-	815	No protein	-	lncRNA	-	-
ENST00000740763.1	-	778	No protein	-	lncRNA	-	-
ENST00000740767.1	-	750	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 999 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000442684.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000442684.2

Summary

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Transcript: ENST00000442684.2

Summary

About Us

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